CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.1773 rna-evm.model.Chr10.1773.1 Chr10 54722234 54758371 PREDICTED: Coiled-coil domain-containing protein 150 nan K10352
gene-evm.TU.Chr10.1774 rna-evm.model.Chr10.1774 Chr10 54766931 54780859 uncharacterized protein nan K14770
gene-evm.TU.Chr10.1775 rna-evm.model.Chr10.1775 Chr10 54784475 54786002 PREDICTED: Alpha-(1,3)-fucosyltransferase C GO:0006486;GO:0008417;GO:0016020 K14464
gene-evm.TU.Chr10.1776 rna-evm.model.Chr10.1776 Chr10 54804615 54814976 uncharacterized protein nan K16782
gene-evm.TU.Chr10.1777 rna-evm.model.Chr10.1777 Chr10 54815023 54821581 uncharacterized protein nan nan
gene-evm.TU.Chr10.1778 rna-evm.model.Chr10.1778 Chr10 54825314 54841246 PREDICTED: Endoglucanase F GO:0004553;GO:0005975 K01179
gene-evm.TU.Chr10.1781 rna-evm.model.Chr10.1781 Chr10 54881799 54881975 PREDICTED: protein ALP1-like nan K23222
gene-evm.TU.Chr10.1782 rna-evm.model.Chr10.1782 Chr10 54888253 54898482 PREDICTED: Innexin unc-9 nan K22037
gene-evm.TU.Chr10.1784 rna-evm.model.Chr10.1784 Chr10 54907051 54907788 uncharacterized protein nan K24534
gene-evm.TU.Chr10.1785 rna-evm.model.Chr10.1785 Chr10 54910654 54915635 uncharacterized protein nan K03121

For more detailed data, you can explore the Download section to access the full dataset.