CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.1726 rna-evm.model.Chr10.1726 Chr10 53806181 53806546 PREDICTED: zinc finger MYM-type protein 2-like nan K24675
gene-evm.TU.Chr10.1727 rna-evm.model.Chr10.1727 Chr10 53810908 53811606 PREDICTED: Zinc finger MYM-type protein 2 nan K24675
gene-evm.TU.Chr10.1728 rna-evm.model.Chr10.1728 Chr10 53814743 53821378 uncharacterized protein nan nan
gene-evm.TU.Chr10.1729 rna-evm.model.Chr10.1729 Chr10 53821425 53839787 uncharacterized protein nan K16782
gene-evm.TU.Chr10.173 rna-evm.model.Chr10.173 Chr10 5900777 6030666 PREDICTED: Cholecystokinin receptor type A GO:0004930;GO:0007186;GO:0016020 K04238
gene-evm.TU.Chr10.1730 rna-evm.model.Chr10.1730 Chr10 53847402 53848952 PREDICTED: Alpha-(1,3)-fucosyltransferase C GO:0006486;GO:0008417;GO:0016020 K14464
gene-evm.TU.Chr10.1731 rna-evm.model.Chr10.1731 Chr10 53857731 53866281 uncharacterized protein nan K14770
gene-evm.TU.Chr10.1732 rna-evm.model.Chr10.1732 Chr10 53866437 53907875 PREDICTED: Coiled-coil domain-containing protein 150 nan K10352
gene-evm.TU.Chr10.1733 rna-evm.model.Chr10.1733 Chr10 53915962 53930830 PREDICTED: Thymidine kinase 2, mitochondrial nan K05961
gene-evm.TU.Chr10.1734 rna-evm.model.Chr10.1734 Chr10 53934201 54000269 PREDICTED: actin filament associated protein 1 nan K18616

For more detailed data, you can explore the Download section to access the full dataset.