CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.1713 rna-evm.model.Chr10.1713 Chr10 53655319 53674626 PREDICTED: Zinc finger protein with KRAB and SCAN domains 8 GO:0003676;GO:0003677 K09214
gene-evm.TU.Chr10.1714 rna-evm.model.Chr10.1714 Chr10 53681663 53683856 uncharacterized protein nan nan
gene-evm.TU.Chr10.1715 rna-evm.model.Chr10.1715 Chr10 53695964 53703455 uncharacterized protein nan K06846
gene-evm.TU.Chr10.1716 rna-evm.model.Chr10.1716 Chr10 53708833 53718362 uncharacterized protein nan K06846
gene-evm.TU.Chr10.1718 rna-evm.model.Chr10.1718 Chr10 53720256 53722596 uncharacterized protein nan K04008
gene-evm.TU.Chr10.1719 rna-evm.model.Chr10.1719 Chr10 53723730 53724080 PREDICTED: calcium permeable stress-gated cation channel nan K07499
gene-evm.TU.Chr10.1720 rna-evm.model.Chr10.1720 Chr10 53726717 53728721 uncharacterized protein nan K16105
gene-evm.TU.Chr10.1721 rna-evm.model.Chr10.1721 Chr10 53729802 53731583 uncharacterized protein nan K23086
gene-evm.TU.Chr10.1723 rna-evm.model.Chr10.1723 Chr10 53746809 53754867 PREDICTED: Innexin unc-9 nan K22037
gene-evm.TU.Chr10.1725 rna-evm.model.Chr10.1725 Chr10 53790633 53798607 PREDICTED: Endoglucanase F GO:0004553;GO:0005975 K01179

For more detailed data, you can explore the Download section to access the full dataset.