CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.1651 rna-evm.model.Chr10.1651 Chr10 52123284 52125749 PREDICTED: c-src tyrosine kinase [EC:2.7.10.2] GO:0003676;GO:0005515;GO:0008270 K17277
gene-evm.TU.Chr10.1652 rna-evm.model.Chr10.1652 Chr10 52136242 52147847 PREDICTED: Inhibitor of growth protein 5 GO:0005634;GO:0008285;GO:0016573;GO:0035064;GO:0043065 K11345
gene-evm.TU.Chr10.1658 rna-evm.model.Chr10.1658 Chr10 52490574 52502383 PREDICTED: Histone-lysine N-methyltransferase PRDM16 GO:0003676;GO:0003677 K04462
gene-evm.TU.Chr10.1660 rna-evm.model.Chr10.1660 Chr10 52601304 52615566 PREDICTED: MDS1 and EVI1 complex locus protein EVI1-A GO:0003676 K04462
gene-evm.TU.Chr10.1662 rna-evm.model.Chr10.1662 Chr10 52726061 52737773 PREDICTED: Phospholipid scramblase 2 GO:0017121;GO:0017128 nan
gene-evm.TU.Chr10.1663 rna-evm.model.Chr10.1663 Chr10 52753405 52772023 PREDICTED: Phospholipid scramblase 3 GO:0017121;GO:0017128 nan
gene-evm.TU.Chr10.1664 rna-evm.model.Chr10.1664 Chr10 52772148 52773165 PREDICTED: Phospholipid scramblase 1 GO:0017121;GO:0017128 nan
gene-evm.TU.Chr10.1665 rna-evm.model.Chr10.1665 Chr10 52778668 52790597 PREDICTED: Phospholipid scramblase 2 GO:0017121;GO:0017128 nan
gene-evm.TU.Chr10.1666 rna-evm.model.Chr10.1666 Chr10 52795298 52799737 PREDICTED: Cornifin-A GO:0017121;GO:0017128 K06237
gene-evm.TU.Chr10.1667 rna-evm.model.Chr10.1667 Chr10 52800980 52806664 PREDICTED: Phospholipid scramblase 2 GO:0017121;GO:0017128 K16062

For more detailed data, you can explore the Download section to access the full dataset.