CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.1196 rna-evm.model.Chr10.1196 Chr10 38075756 38076784 PREDICTED: Transposable element Tcb2 transposase GO:0003677;GO:0006313;GO:0015074 K07494
gene-evm.TU.Chr10.1198 rna-evm.model.Chr10.1198 Chr10 38085647 38086228 PREDICTED: Transposable element Tc1 transposase GO:0003677;GO:0006313;GO:0015074 K07499
gene-evm.TU.Chr10.120 rna-evm.model.Chr10.120 Chr10 4361344 4374123 PREDICTED: Perlucin nan K06954
gene-evm.TU.Chr10.1200 rna-evm.model.Chr10.1200 Chr10 38174375 38174647 uncharacterized protein nan nan
gene-evm.TU.Chr10.1202 rna-evm.model.Chr10.1202 Chr10 38230179 38230565 PREDICTED: Putative apoptosis inhibitor ORF99 nan K04725
gene-evm.TU.Chr10.1203 rna-evm.model.Chr10.1203 Chr10 38241136 38243604 PREDICTED: AF4/FMR2 family member 4 nan K11126
gene-evm.TU.Chr10.1204 rna-evm.model.Chr10.1204 Chr10 38272333 38273358 PREDICTED: CD109 antigen nan K16467
gene-evm.TU.Chr10.1206 rna-evm.model.Chr10.1206 Chr10 38315864 38317111 PREDICTED: Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 nan K23222
gene-evm.TU.Chr10.1207 rna-evm.model.Chr10.1207 Chr10 38318843 38321036 uncharacterized protein nan K01587
gene-evm.TU.Chr10.1208 rna-evm.model.Chr10.1208 Chr10 38349316 38349696 PREDICTED: Protein GVQW3 nan K11433

For more detailed data, you can explore the Download section to access the full dataset.