CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.1136 rna-evm.model.Chr10.1136 Chr10 36120073 36130111 uncharacterized protein nan nan
gene-evm.TU.Chr10.114 rna-evm.model.Chr10.114 Chr10 4181513 4181737 uncharacterized protein nan K23225
gene-evm.TU.Chr10.1140 rna-evm.model.Chr10.1140 Chr10 36298856 36305434 PREDICTED: NLR family CARD domain-containing protein 3 nan K00949
gene-evm.TU.Chr10.1141 rna-evm.model.Chr10.1141 Chr10 36336294 36338474 uncharacterized protein nan K16680
gene-evm.TU.Chr10.1142 rna-evm.model.Chr10.1142 Chr10 36340730 36348439 PREDICTED: Zinc finger MYM-type protein 3 nan K21754
gene-evm.TU.Chr10.1144 rna-evm.model.Chr10.1144 Chr10 36512457 36548477 PREDICTED: Hemicentin-1 nan K24496
gene-evm.TU.Chr10.1146 rna-evm.model.Chr10.1146 Chr10 36561666 36563539 uncharacterized protein nan K01396
gene-evm.TU.Chr10.1149 rna-evm.model.Chr10.1149 Chr10 36588619 36605532 PREDICTED: Contactin-5 nan K24496
gene-evm.TU.Chr10.115 rna-evm.model.Chr10.115 Chr10 4254132 4260767 uncharacterized protein nan K00977
gene-evm.TU.Chr10.1150 rna-evm.model.Chr10.1150 Chr10 36618922 36631810 PREDICTED: Titin nan K24496

For more detailed data, you can explore the Download section to access the full dataset.