CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.1051 rna-evm.model.Chr10.1051 Chr10 34024484 34041602 PREDICTED: Probable G-protein coupled receptor 153 GO:0004930;GO:0007186;GO:0016020 K08437
gene-evm.TU.Chr10.1052 rna-evm.model.Chr10.1052 Chr10 34072022 34073035 PREDICTED: ATP-dependent DNA helicase Q-like 3 GO:0003676;GO:0005524 K10901
gene-evm.TU.Chr10.1053 rna-evm.model.Chr10.1053 Chr10 34137189 34139516 PREDICTED: Putative acyl-CoA synthetase YngI GO:0003824 K00666
gene-evm.TU.Chr10.1055 rna-evm.model.Chr10.1055 Chr10 34153860 34155936 PREDICTED: Putative acyl-CoA synthetase YngI GO:0003824 K00666
gene-evm.TU.Chr10.1058 rna-evm.model.Chr10.1058 Chr10 34171439 34173772 PREDICTED: Putative acyl-CoA synthetase YngI GO:0003824 K00666
gene-evm.TU.Chr10.1059 rna-evm.model.Chr10.1059 Chr10 34180301 34186471 PREDICTED: Ornithine decarboxylase GO:0003824;GO:0006596 K01581
gene-evm.TU.Chr10.106 rna-evm.model.Chr10.106 Chr10 3942203 3944289 PREDICTED: Collagen alpha-5(VI) chain GO:0003676 K14573
gene-evm.TU.Chr10.1061 rna-evm.model.Chr10.1061 Chr10 34205871 34210027 PREDICTED: Antizyme inhibitor 2 GO:0003824;GO:0006596 K01581
gene-evm.TU.Chr10.1063 rna-evm.model.Chr10.1063 Chr10 34258993 34260512 PREDICTED: short-chain collagen C4-like nan K22719
gene-evm.TU.Chr10.1064 rna-evm.model.Chr10.1064 Chr10 34266928 34268630 PREDICTED: complement component 4 nan K22257

For more detailed data, you can explore the Download section to access the full dataset.