CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.1101 rna-evm.model.Chr10.1101 Chr10 35372419 35407408 PREDICTED: Solute carrier family 2, facilitated glucose transporter member 1 GO:0016020;GO:0016020;GO:0022857;GO:0055085 K07299
gene-evm.TU.Chr10.1102 rna-evm.model.Chr10.1102 Chr10 35409847 35427279 PREDICTED: Solute carrier family 2, facilitated glucose transporter member 1 GO:0016020;GO:0016020;GO:0022857;GO:0055085 K07299
gene-evm.TU.Chr10.1105 rna-evm.model.Chr10.1105 Chr10 35537191 35538845 PREDICTED: Cytoglobin-2 GO:0020037 K21893
gene-evm.TU.Chr10.1106 rna-evm.model.Chr10.1106 Chr10 35543198 35544867 uncharacterized protein nan nan
gene-evm.TU.Chr10.1107 rna-evm.model.Chr10.1107 Chr10 35584780 35586527 PREDICTED: Cytoglobin-2 GO:0020037 K21893
gene-evm.TU.Chr10.1108 rna-evm.model.Chr10.1108 Chr10 35604388 35606148 PREDICTED: Cytoglobin-2 GO:0020037 K21893
gene-evm.TU.Chr10.1109 rna-evm.model.Chr10.1109 Chr10 35705634 35708543 PREDICTED: Cytoglobin GO:0019825;GO:0020037 K21893
gene-evm.TU.Chr10.1110_evm.TU.Chr10.1111 rna-evm.model.Chr10.1110_evm.model.Chr10.1111 Chr10 35727673 35747473 PREDICTED: Cytoglobin GO:0019825;GO:0020037 K21893
gene-evm.TU.Chr10.1112 rna-evm.model.Chr10.1112 Chr10 35750672 35752995 PREDICTED: Uncharacterized protein KIAA1958 nan K24675
gene-evm.TU.Chr10.1113 rna-evm.model.Chr10.1113 Chr10 35760512 35762471 PREDICTED: Non-symbiotic hemoglobin 1 GO:0020037 K21893

For more detailed data, you can explore the Download section to access the full dataset.