CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr1.986 rna-evm.model.Chr1.986 Chr1 30093889 30101769 PREDICTED: myosin heavy chain GO:0005741;GO:0035694 K10402
gene-evm.TU.Chr1.987 rna-evm.model.Chr1.987 Chr1 30104591 30106499 PREDICTED: Polysialoglycoprotein nan K09789
gene-evm.TU.Chr1.988 rna-evm.model.Chr1.988 Chr1 30111961 30118995 PREDICTED: myosin heavy chain nan K22804
gene-evm.TU.Chr1.99 rna-evm.model.Chr1.99 Chr1 3281926 3296560 PREDICTED: Exosome complex component RRP43 GO:0000178;GO:0006396;GO:0006401 K12586
gene-evm.TU.Chr1.991 rna-evm.model.Chr1.991 Chr1 30157823 30172626 PREDICTED: myosin heavy chain nan K07706
gene-evm.TU.Chr1.992 rna-evm.model.Chr1.992 Chr1 30185687 30186019 uncharacterized protein nan K14795
gene-evm.TU.Chr1.993 rna-evm.model.Chr1.993 Chr1 30186100 30187631 uncharacterized protein nan K06954
gene-evm.TU.Chr1.994 rna-evm.model.Chr1.994 Chr1 30187932 30196277 uncharacterized protein nan nan
gene-evm.TU.Chr1.995 rna-evm.model.Chr1.995 Chr1 30242907 30291756 PREDICTED: Proline-rich transmembrane protein 1 GO:0016020 K23896
gene-evm.TU.Chr1.996 rna-evm.model.Chr1.996 Chr1 30297809 30300235 PREDICTED: Heavy metal-binding protein HIP nan K23284

For more detailed data, you can explore the Download section to access the full dataset.