CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr19.858 rna-evm.model.Chr19.858 Chr19 27796205 28078003 PREDICTED: Atrial natriuretic peptide receptor 1 GO:0004672;GO:0005524;GO:0006468;GO:0009190;GO:0016020;GO:0016849;GO:0035556 K12323
gene-evm.TU.Chr19.859 rna-evm.model.Chr19.859 Chr19 28086429 28105779 PREDICTED: proteophosphoglycan ppg4 nan K25030
gene-evm.TU.Chr19.86 rna-evm.model.Chr19.86 Chr19 5853257 5853436 uncharacterized protein nan nan
gene-evm.TU.Chr19.860 rna-evm.model.Chr19.860 Chr19 28119642 28129672 PREDICTED: Collagen alpha-5(VI) chain nan K14405
gene-evm.TU.Chr19.864 rna-evm.model.Chr19.864 Chr19 28183311 28184016 PREDICTED: S-antigen protein nan K24259
gene-evm.TU.Chr19.866 rna-evm.model.Chr19.866 Chr19 28296058 28456724 PREDICTED: Vacuolar protein sorting-associated protein 13A nan K19525
gene-evm.TU.Chr19.867 rna-evm.model.Chr19.867 Chr19 28624137 28802967 PREDICTED: golgin subfamily A member 4 nan K10421
gene-evm.TU.Chr19.868 rna-evm.model.Chr19.868 Chr19 28803420 28862506 PREDICTED: golgin subfamily A member 4 nan K17589
gene-evm.TU.Chr19.869 rna-evm.model.Chr19.869 Chr19 28864509 28906007 PREDICTED: golgin subfamily A member 4 nan K27233
gene-evm.TU.Chr19.87 rna-evm.model.Chr19.87 Chr19 5869136 5869306 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.