CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr19.800 rna-evm.model.Chr19.800 Chr19 25685625 25730123 PREDICTED: Multiple epidermal growth factor-like domains protein 11 nan K17253
gene-evm.TU.Chr19.801 rna-evm.model.Chr19.801 Chr19 25732879 25741881 PREDICTED: Calmodulin-like protein 4 GO:0005509 K02183
gene-evm.TU.Chr19.803 rna-evm.model.Chr19.803 Chr19 25767520 25807735 PREDICTED: Multiple epidermal growth factor-like domains protein 11 nan K17253
gene-evm.TU.Chr19.804 rna-evm.model.Chr19.804 Chr19 25818562 25828536 uncharacterized protein nan nan
gene-evm.TU.Chr19.805 rna-evm.model.Chr19.805 Chr19 25829294 25837096 PREDICTED: Neurogenic locus notch homolog protein 4 nan K16681
gene-evm.TU.Chr19.806 rna-evm.model.Chr19.806 Chr19 25847930 25863521 PREDICTED: Ras-related protein Rab-8A GO:0003924;GO:0005525 K07902
gene-evm.TU.Chr19.807 rna-evm.model.Chr19.807 Chr19 25918017 25924722 PREDICTED: Transmembrane protein 267 nan K07038
gene-evm.TU.Chr19.808 rna-evm.model.Chr19.808 Chr19 25928200 25938143 PREDICTED: Mitochondrial coenzyme A transporter SLC25A42 GO:0005743;GO:0022857;GO:0055085 K15085
gene-evm.TU.Chr19.811 rna-evm.model.Chr19.811 Chr19 25976131 25976517 uncharacterized protein nan K21402
gene-evm.TU.Chr19.814 rna-evm.model.Chr19.814 Chr19 26031841 26195111 PREDICTED: CUGBP Elav-like family member 4 GO:0003676 K13207

For more detailed data, you can explore the Download section to access the full dataset.