CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr19.748 rna-evm.model.Chr19.748 Chr19 23907109 23907789 uncharacterized protein nan K25600
gene-evm.TU.Chr19.749 rna-evm.model.Chr19.749 Chr19 23997122 23998677 PREDICTED: Beta-1,4-galactosyltransferase galt-1 nan K14434
gene-evm.TU.Chr19.75 rna-evm.model.Chr19.75 Chr19 5239806 5240527 PREDICTED: Protein unc-13 homolog C nan K26456
gene-evm.TU.Chr19.750_evm.TU.Chr19.751 rna-evm.model.Chr19.750_evm.model.Chr19.751 Chr19 24017354 24031784 PREDICTED: Melatonin receptor type 1B GO:0004930;GO:0007186;GO:0016020 K04286
gene-evm.TU.Chr19.752 rna-evm.model.Chr19.752 Chr19 24035582 24040532 PREDICTED: Transmembrane protein 145 nan K25874
gene-evm.TU.Chr19.754 rna-evm.model.Chr19.754 Chr19 24076728 24090290 uncharacterized protein nan nan
gene-evm.TU.Chr19.755 rna-evm.model.Chr19.755 Chr19 24110911 24112131 PREDICTED: Coagulation factor V nan K25371
gene-evm.TU.Chr19.757 rna-evm.model.Chr19.757 Chr19 24146838 24147799 PREDICTED: vacuolar protein sorting-associated protein 16 nan K19679
gene-evm.TU.Chr19.758 rna-evm.model.Chr19.758 Chr19 24164300 24164862 PREDICTED: Thyroid adenoma-associated protein nan K24169
gene-evm.TU.Chr19.759 rna-evm.model.Chr19.759 Chr19 24165252 24174222 PREDICTED: Thyroid adenoma-associated protein nan K24169

For more detailed data, you can explore the Download section to access the full dataset.