CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr19.725 rna-evm.model.Chr19.725 Chr19 23281359 23284681 uncharacterized protein nan K06846
gene-evm.TU.Chr19.726 rna-evm.model.Chr19.726 Chr19 23288917 23290883 PREDICTED: Fibrinogen alpha chain nan K25409
gene-evm.TU.Chr19.727 rna-evm.model.Chr19.727 Chr19 23367601 23368650 uncharacterized protein nan nan
gene-evm.TU.Chr19.728 rna-evm.model.Chr19.728 Chr19 23427942 23451766 PREDICTED: Potassium voltage-gated channel subfamily H member 7 GO:0005216;GO:0005249;GO:0006811;GO:0006813;GO:0016020;GO:0055085 K04910
gene-evm.TU.Chr19.729 rna-evm.model.Chr19.729 Chr19 23507084 23508144 uncharacterized protein nan nan
gene-evm.TU.Chr19.73 rna-evm.model.Chr19.73 Chr19 5236077 5237253 PREDICTED: trichohyalin nan nan
gene-evm.TU.Chr19.730 rna-evm.model.Chr19.730 Chr19 23514470 23530646 PREDICTED: Caspase-6 GO:0004197;GO:0006508;GO:0008234 K04400
gene-evm.TU.Chr19.731 rna-evm.model.Chr19.731 Chr19 23540119 23556286 uncharacterized protein nan K09721
gene-evm.TU.Chr19.735 rna-evm.model.Chr19.735 Chr19 23660310 23686955 PREDICTED: Uncharacterized protein CXorf38 nan K16308
gene-evm.TU.Chr19.736 rna-evm.model.Chr19.736 Chr19 23691719 23714429 PREDICTED: synaptonemal complex protein 1-like nan K10051

For more detailed data, you can explore the Download section to access the full dataset.