CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr19.655 rna-evm.model.Chr19.655 Chr19 21608596 21614204 PREDICTED: chitinase [EC:3.2.1.14] nan nan
gene-evm.TU.Chr19.656 rna-evm.model.Chr19.656 Chr19 21617715 21621139 PREDICTED: fibroin heavy chain-like nan nan
gene-evm.TU.Chr19.657 rna-evm.model.Chr19.657 Chr19 21633490 21642346 PREDICTED: Peroxidasin homolog nan K06754
gene-evm.TU.Chr19.658 rna-evm.model.Chr19.658 Chr19 21643551 21653490 PREDICTED: Collagen alpha-1(XXIV) chain nan K13884
gene-evm.TU.Chr19.659 rna-evm.model.Chr19.659 Chr19 21658424 21677968 uncharacterized protein nan nan
gene-evm.TU.Chr19.66 rna-evm.model.Chr19.66 Chr19 4668422 4673923 uncharacterized protein nan nan
gene-evm.TU.Chr19.660 rna-evm.model.Chr19.660 Chr19 21687750 21717493 PREDICTED: Kinesin-like protein KIF23 GO:0000915;GO:0003777;GO:0005524;GO:0007018;GO:0008017;GO:0072383 K17387
gene-evm.TU.Chr19.663 rna-evm.model.Chr19.663 Chr19 21745774 21791005 PREDICTED: Multiple epidermal growth factor-like domains protein 6 nan K13297
gene-evm.TU.Chr19.664 rna-evm.model.Chr19.664 Chr19 21791788 21804217 PREDICTED: Multiple epidermal growth factor-like domains protein 6 nan K24333
gene-evm.TU.Chr19.665 rna-evm.model.Chr19.665 Chr19 21819362 21830155 PREDICTED: C1q-related factor nan K23284

For more detailed data, you can explore the Download section to access the full dataset.