CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr19.628 rna-evm.model.Chr19.628 Chr19 20900047 20900652 uncharacterized protein nan K27162
gene-evm.TU.Chr19.629 rna-evm.model.Chr19.629 Chr19 20900940 20902175 PREDICTED: Transposon TX1 uncharacterized 149 kDa protein nan K01142
gene-evm.TU.Chr19.63 rna-evm.model.Chr19.63 Chr19 4480591 4502462 PREDICTED: Sodium-coupled monocarboxylate transporter 2 GO:0016020;GO:0022857;GO:0055085 K14386
gene-evm.TU.Chr19.630 rna-evm.model.Chr19.630 Chr19 20958229 20960951 PREDICTED: hepatoma-derived growth factor-related protein 2-like nan K06240
gene-evm.TU.Chr19.635 rna-evm.model.Chr19.635 Chr19 21004156 21016124 PREDICTED: AGAP002737-PA, partial nan K03646
gene-evm.TU.Chr19.636 rna-evm.model.Chr19.636 Chr19 21016429 21028540 PREDICTED: PC4 and SFRS1-interacting protein nan K25065
gene-evm.TU.Chr19.637 rna-evm.model.Chr19.637 Chr19 21038468 21051553 PREDICTED: Tetratricopeptide repeat protein 23 nan K24934
gene-evm.TU.Chr19.638 rna-evm.model.Chr19.638 Chr19 21134882 21146248 PREDICTED: Lens epithelium-derived growth factor nan K25065
gene-evm.TU.Chr19.639 rna-evm.model.Chr19.639 Chr19 21146269 21148671 PREDICTED: hepatoma-derived growth factor-related protein 2-like nan K14532
gene-evm.TU.Chr19.64 rna-evm.model.Chr19.64 Chr19 4516973 4522115 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.