CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr19.61 rna-evm.model.Chr19.61 Chr19 4107811 4109388 PREDICTED: exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] nan K12575
gene-evm.TU.Chr19.610 rna-evm.model.Chr19.610 Chr19 20052632 20053312 uncharacterized protein nan K16584
gene-evm.TU.Chr19.612 rna-evm.model.Chr19.612 Chr19 20068348 20073302 PREDICTED: Angiopoietin-related protein 2 nan K25409
gene-evm.TU.Chr19.614 rna-evm.model.Chr19.614 Chr19 20119230 20119681 PREDICTED: Ras homolog enriched in brain nan K18004
gene-evm.TU.Chr19.616 rna-evm.model.Chr19.616 Chr19 20291816 20293138 PREDICTED: Uncharacterized protein F54H12.2 GO:0055114 nan
gene-evm.TU.Chr19.617 rna-evm.model.Chr19.617 Chr19 20293707 20294183 uncharacterized protein nan nan
gene-evm.TU.Chr19.619 rna-evm.model.Chr19.619 Chr19 20294978 20300345 PREDICTED: Zinc finger protein 92 homolog GO:0003676 K09230
gene-evm.TU.Chr19.623 rna-evm.model.Chr19.623 Chr19 20640822 20668901 PREDICTED: solute carrier family 5 (sodium-dependent multivitamin transporter), member 6 nan K14386
gene-evm.TU.Chr19.624 rna-evm.model.Chr19.624 Chr19 20719281 20723745 PREDICTED: Putative nuclease HARBI1 nan K23222
gene-evm.TU.Chr19.625 rna-evm.model.Chr19.625 Chr19 20725321 20735307 PREDICTED: Myb/SANT-like DNA-binding domain-containing protein 4 GO:0005634;GO:0006915 K23221

For more detailed data, you can explore the Download section to access the full dataset.