CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr19.460 rna-evm.model.Chr19.460 Chr19 16125457 16129147 uncharacterized protein nan nan
gene-evm.TU.Chr19.461 rna-evm.model.Chr19.461 Chr19 16135210 16173575 PREDICTED: MYCBP-associated protein nan K25648
gene-evm.TU.Chr19.462 rna-evm.model.Chr19.462 Chr19 16173732 16183919 PREDICTED: Phosphatidyl-N-methylethanolamine N-methyltransferase GO:0006656;GO:0008757 K00551
gene-evm.TU.Chr19.463 rna-evm.model.Chr19.463 Chr19 16198233 16205323 PREDICTED: adenomatosis polyposis coli protein nan K02085
gene-evm.TU.Chr19.465 rna-evm.model.Chr19.465 Chr19 16218750 16224802 PREDICTED: adenomatosis polyposis coli protein nan K02085
gene-evm.TU.Chr19.466 rna-evm.model.Chr19.466 Chr19 16225597 16241492 PREDICTED: Adenomatous polyposis coli protein GO:0005515;GO:0008013;GO:0016055;GO:0030178 K02085
gene-evm.TU.Chr19.467 rna-evm.model.Chr19.467 Chr19 16247612 16253074 PREDICTED: BTB/POZ domain-containing protein 2 GO:0005515 K10478
gene-evm.TU.Chr19.468 rna-evm.model.Chr19.468 Chr19 16260862 16269512 PREDICTED: methyltransferase-like protein 24 nan K16381
gene-evm.TU.Chr19.469 rna-evm.model.Chr19.469 Chr19 16273693 16274448 PREDICTED: BRISC and BRCA1-A complex member 1 nan K20283
gene-evm.TU.Chr19.470 rna-evm.model.Chr19.470 Chr19 16280049 16289355 PREDICTED: Interleukin-6 receptor subunit beta GO:0005515 K05060

For more detailed data, you can explore the Download section to access the full dataset.