CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr19.435 rna-evm.model.Chr19.435 Chr19 14951055 14951812 PREDICTED: sporulation-specific protein 15-like nan K20773
gene-evm.TU.Chr19.436 rna-evm.model.Chr19.436 Chr19 14992547 14994045 uncharacterized protein nan K22575
gene-evm.TU.Chr19.437 rna-evm.model.Chr19.437 Chr19 15066387 15120950 PREDICTED: SCO-spondin GO:0005515 K06233
gene-evm.TU.Chr19.438 rna-evm.model.Chr19.438 Chr19 15152625 15158732 uncharacterized protein nan nan
gene-evm.TU.Chr19.441 rna-evm.model.Chr19.441 Chr19 15238668 15239273 PREDICTED: Zinc finger and SCAN domain-containing protein 26 GO:0003676 K09191
gene-evm.TU.Chr19.442 rna-evm.model.Chr19.442 Chr19 15250716 15273193 PREDICTED: Centrosomal protein POC5 nan K16483
gene-evm.TU.Chr19.443 rna-evm.model.Chr19.443 Chr19 15286255 15287221 uncharacterized protein nan K08816
gene-evm.TU.Chr19.444 rna-evm.model.Chr19.444 Chr19 15302691 15303341 PREDICTED: frizzled 4 nan K18808
gene-evm.TU.Chr19.446 rna-evm.model.Chr19.446 Chr19 15528689 15675301 uncharacterized protein nan K10061
gene-evm.TU.Chr19.447 rna-evm.model.Chr19.447 Chr19 15696803 15715821 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.