CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr19.23 rna-evm.model.Chr19.23 Chr19 1132116 1162841 uncharacterized protein nan nan
gene-evm.TU.Chr19.230 rna-evm.model.Chr19.230 Chr19 10122085 10163856 PREDICTED: Protogenin GO:0005515 K22657
gene-evm.TU.Chr19.234 rna-evm.model.Chr19.234 Chr19 10334973 10340253 PREDICTED: Uromodulin nan K19899
gene-evm.TU.Chr19.235 rna-evm.model.Chr19.235 Chr19 10346049 10372463 PREDICTED: von Willebrand factor D and EGF domain-containing protein nan K03900
gene-evm.TU.Chr19.236 rna-evm.model.Chr19.236 Chr19 10411954 10427140 PREDICTED: mucin-5AC nan K14563
gene-evm.TU.Chr19.238 rna-evm.model.Chr19.238 Chr19 10438646 10451378 PREDICTED: Uromodulin nan K19899
gene-evm.TU.Chr19.239 rna-evm.model.Chr19.239 Chr19 10454802 10472465 uncharacterized protein nan K06846
gene-evm.TU.Chr19.242 rna-evm.model.Chr19.242 Chr19 10504140 10504580 uncharacterized protein nan nan
gene-evm.TU.Chr19.243 rna-evm.model.Chr19.243 Chr19 10514652 10534624 PREDICTED: von Willebrand factor D and EGF domain-containing protein nan K03900
gene-evm.TU.Chr19.244 rna-evm.model.Chr19.244 Chr19 10541860 10562956 PREDICTED: Titin GO:0008270 K17531

For more detailed data, you can explore the Download section to access the full dataset.