CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr19.134 rna-evm.model.Chr19.134 Chr19 6901634 6939532 uncharacterized protein nan nan
gene-evm.TU.Chr19.135 rna-evm.model.Chr19.135 Chr19 6943639 6970646 PREDICTED: transcription initiation factor TFIID subunit 15 nan K12887
gene-evm.TU.Chr19.136 rna-evm.model.Chr19.136 Chr19 6970711 6988220 uncharacterized protein nan nan
gene-evm.TU.Chr19.137 rna-evm.model.Chr19.137 Chr19 7011672 7025813 PREDICTED: Low-density lipoprotein receptor-related protein GO:0005515 K20053
gene-evm.TU.Chr19.138 rna-evm.model.Chr19.138 Chr19 7032476 7044751 uncharacterized protein nan K01362
gene-evm.TU.Chr19.14 rna-evm.model.Chr19.14 Chr19 752561 753459 uncharacterized protein nan nan
gene-evm.TU.Chr19.140 rna-evm.model.Chr19.140 Chr19 7118003 7122482 PREDICTED: Plasminogen (Fragment) nan K09644
gene-evm.TU.Chr19.141 rna-evm.model.Chr19.141 Chr19 7141423 7141730 uncharacterized protein nan nan
gene-evm.TU.Chr19.142 rna-evm.model.Chr19.142 Chr19 7228217 7241510 PREDICTED: Low-density lipoprotein receptor-related protein 2 GO:0005515 K24498
gene-evm.TU.Chr19.145 rna-evm.model.Chr19.145 Chr19 7292621 7301118 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.