CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr19.1220 rna-evm.model.Chr19.1220 Chr19 41797315 41804216 PREDICTED: chitinase [EC:3.2.1.14] nan nan
gene-evm.TU.Chr19.1222 rna-evm.model.Chr19.1222 Chr19 41929651 41931744 uncharacterized protein nan K24688
gene-evm.TU.Chr19.1223 rna-evm.model.Chr19.1223 Chr19 41978142 41980360 PREDICTED: E1A/CREB-binding protein [EC:2.3.1.48] nan K09060
gene-evm.TU.Chr19.1227 rna-evm.model.Chr19.1227 Chr19 42151058 42153027 PREDICTED: THAP domain-containing protein 11 GO:0003676 K23204
gene-evm.TU.Chr19.1228 rna-evm.model.Chr19.1228 Chr19 42266984 42271170 PREDICTED: exocyst complex component 1 nan nan
gene-evm.TU.Chr19.1229 rna-evm.model.Chr19.1229 Chr19 42457875 42459667 uncharacterized protein nan K00653
gene-evm.TU.Chr19.123 rna-evm.model.Chr19.123 Chr19 6617358 6625460 uncharacterized protein nan K12289
gene-evm.TU.Chr19.1231 rna-evm.model.Chr19.1231 Chr19 42461016 42462535 uncharacterized protein nan K23317
gene-evm.TU.Chr19.1232 rna-evm.model.Chr19.1232 Chr19 42462812 42472427 uncharacterized protein nan nan
gene-evm.TU.Chr19.1234 rna-evm.model.Chr19.1234 Chr19 42849910 42850519 PREDICTED: trichohyalin nan K11014

For more detailed data, you can explore the Download section to access the full dataset.