CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr19.1135 rna-evm.model.Chr19.1135 Chr19 36869899 36870321 uncharacterized protein nan nan
gene-evm.TU.Chr19.1136 rna-evm.model.Chr19.1136 Chr19 36870334 36870687 PREDICTED: Putative apoptosis inhibitor ORF99 nan K16061
gene-evm.TU.Chr19.1137 rna-evm.model.Chr19.1137 Chr19 36964556 36992259 uncharacterized protein nan K05802
gene-evm.TU.Chr19.1139 rna-evm.model.Chr19.1139 Chr19 37098478 37120975 PREDICTED: SAC3 family protein 2 nan K16734
gene-evm.TU.Chr19.114 rna-evm.model.Chr19.114 Chr19 6438856 6453406 PREDICTED: solute carrier family 6 (neurotransmitter transporter, serotonin) member 4 nan K06560
gene-evm.TU.Chr19.1140 rna-evm.model.Chr19.1140 Chr19 37136459 37138909 uncharacterized protein nan K11696
gene-evm.TU.Chr19.1141 rna-evm.model.Chr19.1141 Chr19 37176892 37177835 PREDICTED: Ice nucleation protein nan K16807
gene-evm.TU.Chr19.1142 rna-evm.model.Chr19.1142 Chr19 37185921 37194541 PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A nan nan
gene-evm.TU.Chr19.1146 rna-evm.model.Chr19.1146 Chr19 37335460 37336146 uncharacterized protein nan K01390
gene-evm.TU.Chr19.1147 rna-evm.model.Chr19.1147 Chr19 37428777 37449299 PREDICTED: Sodium-coupled monocarboxylate transporter 1 GO:0016020;GO:0022857;GO:0055085 K14386

For more detailed data, you can explore the Download section to access the full dataset.