CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr19.1077 rna-evm.model.Chr19.1077 Chr19 35377939 35386517 uncharacterized protein nan K04008
gene-evm.TU.Chr19.1078 rna-evm.model.Chr19.1078 Chr19 35395353 35396512 PREDICTED: Complement C1q tumor necrosis factor-related protein 6 nan K24236
gene-evm.TU.Chr19.1079 rna-evm.model.Chr19.1079 Chr19 35397637 35398641 PREDICTED: Transposable element Tcb2 transposase GO:0003677;GO:0006313;GO:0015074 K07499
gene-evm.TU.Chr19.1080 rna-evm.model.Chr19.1080 Chr19 35414438 35415215 PREDICTED: importin-4 nan nan
gene-evm.TU.Chr19.1081 rna-evm.model.Chr19.1081 Chr19 35415435 35417227 PREDICTED: importin-4 nan K11703
gene-evm.TU.Chr19.1084 rna-evm.model.Chr19.1084 Chr19 35480560 35554124 PREDICTED: Fibrinogen C domain-containing protein 1-A GO:0005509 K10104
gene-evm.TU.Chr19.1087 rna-evm.model.Chr19.1087 Chr19 35569759 35570429 PREDICTED: centrosomal protein CEP72 nan K24295
gene-evm.TU.Chr19.1090 rna-evm.model.Chr19.1090 Chr19 35613233 35613622 uncharacterized protein nan K25815
gene-evm.TU.Chr19.1091 rna-evm.model.Chr19.1091 Chr19 35613803 35614921 PREDICTED: Putative uncharacterized transposon-derived protein F54H12.3 GO:0015074 K11451
gene-evm.TU.Chr19.1092 rna-evm.model.Chr19.1092 Chr19 35615352 35616335 PREDICTED: Uncharacterized protein F54H12.2 GO:0055114 nan

For more detailed data, you can explore the Download section to access the full dataset.