CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr18.942 rna-evm.model.Chr18.942 Chr18 36401004 36403583 PREDICTED: Uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02 nan K24295
gene-evm.TU.Chr18.946 rna-evm.model.Chr18.946 Chr18 36469971 36475074 PREDICTED: Insoluble matrix shell protein 2 nan K24400
gene-evm.TU.Chr18.947 rna-evm.model.Chr18.947 Chr18 36479140 36481533 PREDICTED: Insoluble matrix shell protein 2 nan nan
gene-evm.TU.Chr18.948 rna-evm.model.Chr18.948 Chr18 36488357 36490830 PREDICTED: Insoluble matrix shell protein 2 nan K16367
gene-evm.TU.Chr18.949 rna-evm.model.Chr18.949 Chr18 36496245 36503841 uncharacterized protein nan K01276
gene-evm.TU.Chr18.951 rna-evm.model.Chr18.951 Chr18 36682463 36708662 PREDICTED: Nucleolar protein 58 nan K14565
gene-evm.TU.Chr18.953 rna-evm.model.Chr18.953 Chr18 36766389 36773662 PREDICTED: Frizzled-7 GO:0004888;GO:0005515;GO:0007166;GO:0016020;GO:0016020;GO:0016055;GO:0042813 K02432
gene-evm.TU.Chr18.958 rna-evm.model.Chr18.958 Chr18 36828665 36831275 PREDICTED: Complement C1q-like protein 4 nan K23284
gene-evm.TU.Chr18.966 rna-evm.model.Chr18.966 Chr18 36917673 37054741 PREDICTED: supervillin nan nan
gene-evm.TU.Chr18.967 rna-evm.model.Chr18.967 Chr18 37083147 37086391 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.