CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr18.92 rna-evm.model.Chr18.92 Chr18 4586546 4683958 PREDICTED: Potassium voltage-gated channel subfamily H member 8 GO:0005216;GO:0005249;GO:0006811;GO:0006813;GO:0016020;GO:0055085 K04911
gene-evm.TU.Chr18.920 rna-evm.model.Chr18.920 Chr18 35228334 35235036 uncharacterized protein nan K21827
gene-evm.TU.Chr18.922 rna-evm.model.Chr18.922 Chr18 35272975 35280797 uncharacterized protein nan K05056
gene-evm.TU.Chr18.923 rna-evm.model.Chr18.923 Chr18 35286699 35291190 PREDICTED: Sodium-dependent glucose transporter 1 nan K08175
gene-evm.TU.Chr18.924 rna-evm.model.Chr18.924 Chr18 35291280 35291900 PREDICTED: Sodium-dependent glucose transporter 1 GO:0016020;GO:0055085 K08175
gene-evm.TU.Chr18.925 rna-evm.model.Chr18.925 Chr18 35296657 35312912 uncharacterized protein nan K11244
gene-evm.TU.Chr18.926 rna-evm.model.Chr18.926 Chr18 35312917 35314511 uncharacterized protein nan K10804
gene-evm.TU.Chr18.927 rna-evm.model.Chr18.927 Chr18 35314855 35324981 PREDICTED: Probable Bax inhibitor 1 nan K21889
gene-evm.TU.Chr18.93 rna-evm.model.Chr18.93 Chr18 4688644 4689609 PREDICTED: protein kinase D [EC:2.7.11.13] nan nan
gene-evm.TU.Chr18.930 rna-evm.model.Chr18.930 Chr18 35345241 35347225 PREDICTED: Mucin-like protein (Fragment) nan K08619

For more detailed data, you can explore the Download section to access the full dataset.