CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr18.834 rna-evm.model.Chr18.834 Chr18 31902138 31902952 PREDICTED: Putative phosphatidate phosphatase nan K01080
gene-evm.TU.Chr18.836 rna-evm.model.Chr18.836.1 Chr18 31945061 32043348 PREDICTED: Disco-interacting protein 2 homolog C GO:0003824 K24909
gene-evm.TU.Chr18.838 rna-evm.model.Chr18.838 Chr18 32131585 32143437 PREDICTED: Protein CNPPD1 GO:0000079;GO:0019901 K21197
gene-evm.TU.Chr18.839 rna-evm.model.Chr18.839 Chr18 32147703 32148647 PREDICTED: homeodomain interacting protein kinase [EC:2.7.11.1] nan K00983
gene-evm.TU.Chr18.84 rna-evm.model.Chr18.84 Chr18 3898365 3899417 PREDICTED: exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] nan K21954
gene-evm.TU.Chr18.840 rna-evm.model.Chr18.840 Chr18 32157574 32157927 PREDICTED: CD109 antigen nan nan
gene-evm.TU.Chr18.841 rna-evm.model.Chr18.841 Chr18 32161662 32204165 PREDICTED: Cilia- and flagella-associated protein 65 nan K24226
gene-evm.TU.Chr18.842 rna-evm.model.Chr18.842 Chr18 32209043 32210779 uncharacterized protein nan K00145
gene-evm.TU.Chr18.843 rna-evm.model.Chr18.843 Chr18 32213499 32214633 PREDICTED: Interferon-induced helicase C domain-containing protein 1 GO:0042981 K12646
gene-evm.TU.Chr18.844 rna-evm.model.Chr18.844 Chr18 32222419 32229467 PREDICTED: Interferon-induced helicase C domain-containing protein 1 nan K12646

For more detailed data, you can explore the Download section to access the full dataset.