CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr18.802 rna-evm.model.Chr18.802 Chr18 30602322 30606764 PREDICTED: Mariner Mos1 transposase nan K11433
gene-evm.TU.Chr18.806 rna-evm.model.Chr18.806 Chr18 30634423 30667479 PREDICTED: Obg-like ATPase 1 GO:0005525 K19788
gene-evm.TU.Chr18.809 rna-evm.model.Chr18.809 Chr18 30693471 30695516 uncharacterized protein nan nan
gene-evm.TU.Chr18.810 rna-evm.model.Chr18.810 Chr18 30701918 30705580 uncharacterized protein nan nan
gene-evm.TU.Chr18.812 rna-evm.model.Chr18.812 Chr18 30855908 30859557 uncharacterized protein nan K24350
gene-evm.TU.Chr18.813 rna-evm.model.Chr18.813 Chr18 30871155 30901427 PREDICTED: Ubiquitin carboxyl-terminal hydrolase 37 GO:0016579;GO:0004843 K11850
gene-evm.TU.Chr18.814 rna-evm.model.Chr18.814 Chr18 30917909 30935289 uncharacterized protein nan K10199
gene-evm.TU.Chr18.815 rna-evm.model.Chr18.815 Chr18 30974063 31053179 PREDICTED: Cardioacceleratory peptide receptor GO:0004930;GO:0005000;GO:0007186;GO:0016020 K08376
gene-evm.TU.Chr18.817 rna-evm.model.Chr18.817.3 Chr18 31187124 31326761 PREDICTED: Dystonin GO:0005509;GO:0005515;GO:0005856;GO:0007010;GO:0008017;GO:0008092 K10382
gene-evm.TU.Chr18.818 rna-evm.model.Chr18.818 Chr18 31340215 31342688 PREDICTED: Serine-enriched protein GO:0005515 K10478

For more detailed data, you can explore the Download section to access the full dataset.