CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr18.732 rna-evm.model.Chr18.732 Chr18 28493478 28500109 PREDICTED: Baculoviral IAP repeat-containing protein 7-B nan K16061
gene-evm.TU.Chr18.733 rna-evm.model.Chr18.733 Chr18 28513263 28513934 PREDICTED: cysteinyl leukotriene receptor 1 GO:0016020 K08428
gene-evm.TU.Chr18.735 rna-evm.model.Chr18.735 Chr18 28547868 28559831 uncharacterized protein nan nan
gene-evm.TU.Chr18.736 rna-evm.model.Chr18.736 Chr18 28565280 28588643 PREDICTED: Importin subunit beta-1 GO:0005515;GO:0006606;GO:0006886;GO:0031267 K14293
gene-evm.TU.Chr18.737 rna-evm.model.Chr18.737 Chr18 28592473 28594485 PREDICTED: DNA transposase THAP9 GO:0003676 K23204
gene-evm.TU.Chr18.738 rna-evm.model.Chr18.738 Chr18 28592403 28598106 PREDICTED: Chromatin modification-related protein png2 GO:0008270 K11319
gene-evm.TU.Chr18.739 rna-evm.model.Chr18.739 Chr18 28605229 28606536 uncharacterized protein nan K13681
gene-evm.TU.Chr18.74 rna-evm.model.Chr18.74 Chr18 2884190 2884606 PREDICTED: exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] nan nan
gene-evm.TU.Chr18.740 rna-evm.model.Chr18.740 Chr18 28623323 28635570 PREDICTED: Carbohydrate sulfotransferase 1 GO:0008146 K01022
gene-evm.TU.Chr18.744 rna-evm.model.Chr18.744 Chr18 28673379 28678766 uncharacterized protein nan K13681

For more detailed data, you can explore the Download section to access the full dataset.