CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr18.603 rna-evm.model.Chr18.603 Chr18 23971303 24072099 PREDICTED: Triple functional domain protein GO:0005085;GO:0005515;GO:0035023 K08810
gene-evm.TU.Chr18.604 rna-evm.model.Chr18.604 Chr18 24093032 24101328 uncharacterized protein nan K20690
gene-evm.TU.Chr18.605 rna-evm.model.Chr18.605 Chr18 24119232 24119393 uncharacterized protein nan nan
gene-evm.TU.Chr18.606 rna-evm.model.Chr18.606 Chr18 24126888 24130659 uncharacterized protein nan nan
gene-evm.TU.Chr18.607 rna-evm.model.Chr18.607 Chr18 24132791 24190470 PREDICTED: Triple functional domain protein GO:0005085;GO:0035023 K20690
gene-evm.TU.Chr18.608 rna-evm.model.Chr18.608 Chr18 24205655 24244564 PREDICTED: Kalirin GO:0004672;GO:0005515;GO:0005524;GO:0006468 K15048
gene-evm.TU.Chr18.609 rna-evm.model.Chr18.609 Chr18 24244696 24245347 PREDICTED: kalirin [EC:2.7.11.1] nan K15048
gene-evm.TU.Chr18.610 rna-evm.model.Chr18.610 Chr18 24262235 24285167 PREDICTED: Ribonuclease P protein subunit p25-like protein GO:0003676 K14525
gene-evm.TU.Chr18.613 rna-evm.model.Chr18.613 Chr18 24423220 24426194 PREDICTED: Cephalotocin receptor 2 GO:0004930;GO:0005000;GO:0007186;GO:0016020 K04226
gene-evm.TU.Chr18.614 rna-evm.model.Chr18.614 Chr18 24438446 24438754 PREDICTED: Exodeoxyribonuclease III nan nan

For more detailed data, you can explore the Download section to access the full dataset.