CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr18.551 rna-evm.model.Chr18.551 Chr18 22362257 22367061 uncharacterized protein nan K06776
gene-evm.TU.Chr18.553 rna-evm.model.Chr18.553 Chr18 22398320 22419219 PREDICTED: BTB and MATH domain-containing protein 36 GO:0005515 K13956
gene-evm.TU.Chr18.554 rna-evm.model.Chr18.554 Chr18 22425415 22488486 PREDICTED: Myosin-M heavy chain GO:0005085;GO:0035023 K20705
gene-evm.TU.Chr18.555 rna-evm.model.Chr18.555 Chr18 22493724 22498777 PREDICTED: Interferon-induced helicase C domain-containing protein 1 nan K27032
gene-evm.TU.Chr18.557 rna-evm.model.Chr18.557 Chr18 22571195 22588036 PREDICTED: Interferon-induced helicase C domain-containing protein 1 nan K05724
gene-evm.TU.Chr18.558 rna-evm.model.Chr18.558 Chr18 22598801 22628271 PREDICTED: Endo-1,4-beta-xylanase B nan K12647
gene-evm.TU.Chr18.559 rna-evm.model.Chr18.559 Chr18 22634163 22635927 uncharacterized protein nan nan
gene-evm.TU.Chr18.561 rna-evm.model.Chr18.561 Chr18 22640754 22644311 PREDICTED: Signal peptide, CUB and EGF-like domain-containing protein 2 GO:0005576;GO:0006030;GO:0008061 K24469
gene-evm.TU.Chr18.562 rna-evm.model.Chr18.562 Chr18 22648787 22657977 PREDICTED: Hemicentin-1 nan K16857
gene-evm.TU.Chr18.563 rna-evm.model.Chr18.563 Chr18 22671556 22686981 uncharacterized protein nan K23468

For more detailed data, you can explore the Download section to access the full dataset.