CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr1.2857 rna-evm.model.Chr1.2857 Chr1 89384692 89386316 uncharacterized protein GO:0003676 nan
gene-evm.TU.Chr1.2858 rna-evm.model.Chr1.2858 Chr1 89403238 89407093 PREDICTED: Complement C1q-like protein 4 nan K24236
gene-evm.TU.Chr1.2859 rna-evm.model.Chr1.2859 Chr1 89410123 89411219 PREDICTED: Caprin-2 nan K24236
gene-evm.TU.Chr1.286 rna-evm.model.Chr1.286 Chr1 8822095 8826364 PREDICTED: Transforming growth factor-beta-induced protein ig-h3 nan K19519
gene-evm.TU.Chr1.2861 rna-evm.model.Chr1.2861 Chr1 89455439 89457752 uncharacterized protein GO:0003676 nan
gene-evm.TU.Chr1.2862 rna-evm.model.Chr1.2862 Chr1 89463209 89471587 uncharacterized protein nan nan
gene-evm.TU.Chr1.2864 rna-evm.model.Chr1.2864 Chr1 89477565 89478785 PREDICTED: Complement C1q-like protein 3 nan K24236
gene-evm.TU.Chr1.2866 rna-evm.model.Chr1.2866 Chr1 89612760 89613260 PREDICTED: Zinc finger protein draculin GO:0003676 K09191
gene-evm.TU.Chr1.2867 rna-evm.model.Chr1.2867 Chr1 89615639 89621479 uncharacterized protein nan nan
gene-evm.TU.Chr1.2868 rna-evm.model.Chr1.2868 Chr1 89635937 89639147 PREDICTED: Protein O-mannosyl-transferase TMTC2 GO:0005515 K23424

For more detailed data, you can explore the Download section to access the full dataset.