CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr18.473 rna-evm.model.Chr18.473 Chr18 19050923 19053196 PREDICTED: Death-associated inhibitor of apoptosis 2 nan K04725
gene-evm.TU.Chr18.474 rna-evm.model.Chr18.474 Chr18 19062149 19066516 PREDICTED: Hemicentin-1 nan K16857
gene-evm.TU.Chr18.475 rna-evm.model.Chr18.475 Chr18 19070989 19080573 PREDICTED: Hemicentin-1 nan K04596
gene-evm.TU.Chr18.476 rna-evm.model.Chr18.476 Chr18 19086064 19086848 PREDICTED: Mucin-like protein (Fragment) nan K24436
gene-evm.TU.Chr18.477 rna-evm.model.Chr18.477 Chr18 19095023 19101764 PREDICTED: Complement C1q tumor necrosis factor-related protein 4 nan K24237
gene-evm.TU.Chr18.478 rna-evm.model.Chr18.478 Chr18 19105066 19147632 PREDICTED: Baculoviral IAP repeat-containing protein 3 GO:0042981 K16061
gene-evm.TU.Chr18.479 rna-evm.model.Chr18.479 Chr18 19152015 19161184 PREDICTED: Baculoviral IAP repeat-containing protein 7-A nan K16061
gene-evm.TU.Chr18.481 rna-evm.model.Chr18.481 Chr18 19234933 19249809 PREDICTED: Hemicentin-1 nan K16857
gene-evm.TU.Chr18.483 rna-evm.model.Chr18.483 Chr18 19272235 19278096 PREDICTED: Cytochrome P450 1A2 GO:0005506;GO:0016705;GO:0020037;GO:0055114 K07410
gene-evm.TU.Chr18.484 rna-evm.model.Chr18.484 Chr18 19284073 19287455 uncharacterized protein nan K02284

For more detailed data, you can explore the Download section to access the full dataset.