CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr18.4 rna-evm.model.Chr18.4 Chr18 43485 46725 PREDICTED: Protein GVQW3 nan K07499
gene-evm.TU.Chr18.400 rna-evm.model.Chr18.400 Chr18 16156313 16166490 PREDICTED: Zinc finger CCCH domain-containing protein 15 GO:0046872 K14404
gene-evm.TU.Chr18.401 rna-evm.model.Chr18.401 Chr18 16189711 16216901 PREDICTED: Flagellum-associated coiled-coil domain-containing protein 1 nan K25631
gene-evm.TU.Chr18.402 rna-evm.model.Chr18.402 Chr18 16240550 16243786 uncharacterized protein nan K09213
gene-evm.TU.Chr18.403 rna-evm.model.Chr18.403 Chr18 16249205 16255399 PREDICTED: (S)-2-hydroxy-acid oxidase [EC:1.1.3.15] nan K00477
gene-evm.TU.Chr18.404 rna-evm.model.Chr18.404 Chr18 16267564 16323031 PREDICTED: Spermatogenesis-associated serine-rich protein 2 nan K22260
gene-evm.TU.Chr18.405 rna-evm.model.Chr18.405 Chr18 16331562 16337157 PREDICTED: Eukaryotic translation initiation factor eIF1 GO:0003743;GO:0006413 K03113
gene-evm.TU.Chr18.408 rna-evm.model.Chr18.408 Chr18 16346441 16376408 PREDICTED: N-acetylneuraminate 9-O-acetyltransferase nan K03377
gene-evm.TU.Chr18.409 rna-evm.model.Chr18.409 Chr18 16393897 16397915 PREDICTED: Fucolectin nan nan
gene-evm.TU.Chr18.41 rna-evm.model.Chr18.41 Chr18 1785623 1797149 PREDICTED: Fucolectin-6 nan nan

For more detailed data, you can explore the Download section to access the full dataset.