CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr18.356 rna-evm.model.Chr18.356 Chr18 14755787 14769005 PREDICTED: D-threo-3-hydroxyaspartate dehydratase nan K20498
gene-evm.TU.Chr18.357 rna-evm.model.Chr18.357 Chr18 14802208 14816818 PREDICTED: CAP-Gly domain-containing linker protein 1 nan K10423
gene-evm.TU.Chr18.358 rna-evm.model.Chr18.358 Chr18 14821376 14906662 PREDICTED: Voltage-dependent L-type calcium channel subunit beta-2 GO:0005245;GO:0005515;GO:0005891;GO:0070588 K04863
gene-evm.TU.Chr18.359 rna-evm.model.Chr18.359 Chr18 14906763 14907119 uncharacterized protein nan nan
gene-evm.TU.Chr18.36 rna-evm.model.Chr18.36 Chr18 1617855 1627125 PREDICTED: (S)-2-hydroxy-acid oxidase [EC:1.1.3.15] nan K00477
gene-evm.TU.Chr18.360 rna-evm.model.Chr18.360 Chr18 14923665 15000517 PREDICTED: Dynein heavy chain 7, axonemal GO:0003777;GO:0005509;GO:0005524;GO:0007018;GO:0030286 K10408
gene-evm.TU.Chr18.361 rna-evm.model.Chr18.361 Chr18 15007545 15008449 uncharacterized protein nan nan
gene-evm.TU.Chr18.362 rna-evm.model.Chr18.362 Chr18 15019587 15022023 PREDICTED: Uncharacterized protein SCO4629 nan nan
gene-evm.TU.Chr18.363 rna-evm.model.Chr18.363 Chr18 15026438 15045556 uncharacterized protein nan K21635
gene-evm.TU.Chr18.365 rna-evm.model.Chr18.365 Chr18 15057811 15066486 PREDICTED: Teneurin-3 nan K06052

For more detailed data, you can explore the Download section to access the full dataset.