CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr18.316 rna-evm.model.Chr18.316 Chr18 13581970 13670929 PREDICTED: Coadhesin (Fragment) nan K16857
gene-evm.TU.Chr18.317 rna-evm.model.Chr18.317 Chr18 13699494 13743162 PREDICTED: Hemicentin-1 nan K16857
gene-evm.TU.Chr18.32 rna-evm.model.Chr18.32 Chr18 1513915 1519565 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 GO:0005739;GO:0005747;GO:0022900 K03959
gene-evm.TU.Chr18.320 rna-evm.model.Chr18.320 Chr18 13801049 13807945 uncharacterized protein nan K01169
gene-evm.TU.Chr18.324 rna-evm.model.Chr18.324 Chr18 13851733 13858208 uncharacterized protein nan K01169
gene-evm.TU.Chr18.325 rna-evm.model.Chr18.325 Chr18 13863370 13864854 uncharacterized protein nan K23902
gene-evm.TU.Chr18.326 rna-evm.model.Chr18.326 Chr18 13880560 13883676 uncharacterized protein nan K19932
gene-evm.TU.Chr18.327 rna-evm.model.Chr18.327 Chr18 13896754 13898748 uncharacterized protein nan K19695
gene-evm.TU.Chr18.328 rna-evm.model.Chr18.328 Chr18 13905380 13908169 uncharacterized protein nan K23855
gene-evm.TU.Chr18.33 rna-evm.model.Chr18.33 Chr18 1523278 1544619 PREDICTED: Zinc finger CCCH domain-containing protein 15 GO:0046872 K14404

For more detailed data, you can explore the Download section to access the full dataset.