CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr18.1086 rna-evm.model.Chr18.1086 Chr18 40894738 40895044 PREDICTED: mediator of RNA polymerase II transcription subunit 4 nan K10611
gene-evm.TU.Chr18.1087 rna-evm.model.Chr18.1087 Chr18 41091224 41094828 uncharacterized protein nan K00983
gene-evm.TU.Chr18.1090 rna-evm.model.Chr18.1090 Chr18 41273932 41285876 PREDICTED: interphotoreceptor matrix proteoglycan 2 nan K24471
gene-evm.TU.Chr18.1091 rna-evm.model.Chr18.1091 Chr18 41294722 41303103 PREDICTED: CUB and zona pellucida-like domain-containing protein 1 nan K24793
gene-evm.TU.Chr18.1093 rna-evm.model.Chr18.1093 Chr18 41321144 41326925 uncharacterized protein nan nan
gene-evm.TU.Chr18.1094 rna-evm.model.Chr18.1094 Chr18 41330125 41347984 uncharacterized protein nan nan
gene-evm.TU.Chr18.1095 rna-evm.model.Chr18.1095 Chr18 41354595 41355310 uncharacterized protein nan nan
gene-evm.TU.Chr18.1096 rna-evm.model.Chr18.1096 Chr18 41382947 41419648 PREDICTED: Dipeptidyl peptidase 4 GO:0006508;GO:0008236 K23014
gene-evm.TU.Chr18.1097 rna-evm.model.Chr18.1097 Chr18 41424641 41426467 PREDICTED: Dipeptidyl aminopeptidase-like protein 6 nan K23014
gene-evm.TU.Chr18.1098 rna-evm.model.Chr18.1098 Chr18 41426846 41431043 PREDICTED: ESCRT-I complex subunit TSG101 GO:0046872 K18716

For more detailed data, you can explore the Download section to access the full dataset.