CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr18.1073 rna-evm.model.Chr18.1073 Chr18 40338632 40347858 PREDICTED: Death-associated protein 1 nan nan
gene-evm.TU.Chr18.1074 rna-evm.model.Chr18.1074 Chr18 40354018 40358236 PREDICTED: Foot protein 1 variant 1 nan K10184
gene-evm.TU.Chr18.1075 rna-evm.model.Chr18.1075 Chr18 40368084 40410975 PREDICTED: Electroneutral sodium bicarbonate exchanger 1 GO:0005452;GO:0006820;GO:0008509;GO:0016020;GO:0016020 K13859
gene-evm.TU.Chr18.1076 rna-evm.model.Chr18.1076 Chr18 40434937 40469243 PREDICTED: Electroneutral sodium bicarbonate exchanger 1 GO:0005452;GO:0006820;GO:0008509;GO:0016020;GO:0016020 K13859
gene-evm.TU.Chr18.1077 rna-evm.model.Chr18.1077 Chr18 40470044 40472194 uncharacterized protein nan nan
gene-evm.TU.Chr18.108 rna-evm.model.Chr18.108 Chr18 5040297 5162348 PREDICTED: Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A GO:0006487;GO:0030144 K00744
gene-evm.TU.Chr18.1080 rna-evm.model.Chr18.1080 Chr18 40484781 40505544 PREDICTED: Lactoperoxidase nan K10789
gene-evm.TU.Chr18.1081 rna-evm.model.Chr18.1081 Chr18 40567075 40576789 PREDICTED: Ladderlectin nan K06468
gene-evm.TU.Chr18.1083 rna-evm.model.Chr18.1083 Chr18 40803424 40825455 PREDICTED: Cardioacceleratory peptide receptor GO:0004930;GO:0005000;GO:0007186;GO:0016020 K08376
gene-evm.TU.Chr18.1085 rna-evm.model.Chr18.1085 Chr18 40889091 40893951 uncharacterized protein nan K10374

For more detailed data, you can explore the Download section to access the full dataset.