CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr18.1006 rna-evm.model.Chr18.1006 Chr18 38098403 38223315 PREDICTED: Cyclin-dependent kinase 14 GO:0004672;GO:0005524;GO:0006468 K08821
gene-evm.TU.Chr18.1008 rna-evm.model.Chr18.1008 Chr18 38274081 38274495 uncharacterized protein nan nan
gene-evm.TU.Chr18.1009 rna-evm.model.Chr18.1009 Chr18 38292551 38293618 PREDICTED: Galactoside 2-alpha-L-fucosyltransferase 1 GO:0005975;GO:0008107;GO:0016020 K00718
gene-evm.TU.Chr18.101 rna-evm.model.Chr18.101 Chr18 4849113 4862620 PREDICTED: Uncharacterized protein F54H12.2 GO:0003676 K27287
gene-evm.TU.Chr18.1010 rna-evm.model.Chr18.1010 Chr18 38339616 38358892 PREDICTED: Carbohydrate sulfotransferase 1 GO:0008146 K01022
gene-evm.TU.Chr18.1013 rna-evm.model.Chr18.1013 Chr18 38433207 38441166 uncharacterized protein nan K22243
gene-evm.TU.Chr18.1014 rna-evm.model.Chr18.1014 Chr18 38447841 38448845 PREDICTED: solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12 nan K20380
gene-evm.TU.Chr18.102 rna-evm.model.Chr18.102 Chr18 4869964 4870982 PREDICTED: BTB/POZ domain-containing protein KCTD1/15 nan K04763
gene-evm.TU.Chr18.1021 rna-evm.model.Chr18.1021 Chr18 38655774 38681292 PREDICTED: Collagen alpha-6(VI) chain GO:0005576;GO:0006030;GO:0008061 K06238
gene-evm.TU.Chr18.1022 rna-evm.model.Chr18.1022 Chr18 38687989 38718834 PREDICTED: Cadherin-1 GO:0005509;GO:0007156;GO:0016020;GO:0098609 K05689

For more detailed data, you can explore the Download section to access the full dataset.