CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr1.1154 rna-evm.model.Chr1.1154 Chr1 35927659 35929382 PREDICTED: Iduronate 2-sulfatase GO:0008484 K01136
gene-evm.TU.Chr1.1155 rna-evm.model.Chr1.1155 Chr1 35931535 35935583 uncharacterized protein nan K09548
gene-evm.TU.Chr1.1156 rna-evm.model.Chr1.1156 Chr1 35937806 35941558 PREDICTED: myosin heavy chain nan nan
gene-evm.TU.Chr1.1157 rna-evm.model.Chr1.1157 Chr1 35945361 35946008 uncharacterized protein nan nan
gene-evm.TU.Chr1.1158 rna-evm.model.Chr1.1158 Chr1 35949948 35954889 PREDICTED: Heat shock 70 kDa protein 12B nan K04043
gene-evm.TU.Chr1.1159 rna-evm.model.Chr1.1159 Chr1 35960392 35969136 PREDICTED: DAP3-binding cell death enhancer 1 nan K07126
gene-evm.TU.Chr1.116 rna-evm.model.Chr1.116 Chr1 3701975 3703366 PREDICTED: Acetylcholine receptor subunit alpha GO:0004888;GO:0005216;GO:0005230;GO:0006811;GO:0016020;GO:0034220 K04808
gene-evm.TU.Chr1.1160 rna-evm.model.Chr1.1160 Chr1 35978661 35999361 PREDICTED: Beta-galactosidase GO:0004553;GO:0005975 K12309
gene-evm.TU.Chr1.1161 rna-evm.model.Chr1.1161 Chr1 36002991 36005632 uncharacterized protein nan nan
gene-evm.TU.Chr1.1162 rna-evm.model.Chr1.1162 Chr1 36018674 36019423 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.