CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr17.705 rna-evm.model.Chr17.705 Chr17 21371272 21374949 PREDICTED: Retinol dehydrogenase 14 nan K11162
gene-evm.TU.Chr17.706 rna-evm.model.Chr17.706 Chr17 21382729 21387555 PREDICTED: Meiotic recombination protein REC114 nan K26084
gene-evm.TU.Chr17.708 rna-evm.model.Chr17.708.1 Chr17 21406016 21412080 PREDICTED: Mitochondrial fission factor nan K22076
gene-evm.TU.Chr17.709 rna-evm.model.Chr17.709 Chr17 21417497 21418359 PREDICTED: Aggrecan core protein nan K06721
gene-evm.TU.Chr17.710 rna-evm.model.Chr17.710 Chr17 21426128 21447722 PREDICTED: 40S ribosomal protein S8 GO:0003735;GO:0005840;GO:0006412 K02995
gene-evm.TU.Chr17.712 rna-evm.model.Chr17.712 Chr17 21468349 21478337 PREDICTED: Tetraspanin-11 GO:0016020 K17353
gene-evm.TU.Chr17.713 rna-evm.model.Chr17.713 Chr17 21482105 21486991 uncharacterized protein nan K06452
gene-evm.TU.Chr17.714 rna-evm.model.Chr17.714 Chr17 21495502 21496093 uncharacterized protein nan K17592
gene-evm.TU.Chr17.715 rna-evm.model.Chr17.715 Chr17 21496304 21504142 uncharacterized protein nan K16715
gene-evm.TU.Chr17.716 rna-evm.model.Chr17.716 Chr17 21515565 21517486 uncharacterized protein nan K06449

For more detailed data, you can explore the Download section to access the full dataset.