CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr17.641 rna-evm.model.Chr17.641 Chr17 19265730 19293539 PREDICTED: IgGFc-binding protein nan nan
gene-evm.TU.Chr17.642 rna-evm.model.Chr17.642 Chr17 19298795 19318402 PREDICTED: Ras-related protein Rab-32 GO:0003924;GO:0005525 K07918
gene-evm.TU.Chr17.643 rna-evm.model.Chr17.643 Chr17 19353397 19353779 uncharacterized protein nan K12488
gene-evm.TU.Chr17.644 rna-evm.model.Chr17.644 Chr17 19354009 19354611 PREDICTED: Jerky protein homolog-like GO:0003676 K20992
gene-evm.TU.Chr17.647 rna-evm.model.Chr17.647 Chr17 19382626 19384761 PREDICTED: squid nan K26877
gene-evm.TU.Chr17.648 rna-evm.model.Chr17.648 Chr17 19442891 19443427 PREDICTED: Zinc finger protein 570 GO:0003676 K09228
gene-evm.TU.Chr17.649 rna-evm.model.Chr17.649 Chr17 19450453 19450983 PREDICTED: Zinc finger protein 28 GO:0003676;GO:0003677 K09228
gene-evm.TU.Chr17.65 rna-evm.model.Chr17.65 Chr17 2362799 2378683 PREDICTED: Vitelline membrane outer layer protein 1 nan K25745
gene-evm.TU.Chr17.650 rna-evm.model.Chr17.650 Chr17 19453936 19461645 PREDICTED: Zinc finger protein 570 GO:0003676 K09228
gene-evm.TU.Chr17.651 rna-evm.model.Chr17.651 Chr17 19539504 19541639 PREDICTED: squid nan K26877

For more detailed data, you can explore the Download section to access the full dataset.