CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr17.665 rna-evm.model.Chr17.665 Chr17 20014450 20015517 PREDICTED: solute carrier family 15, member 5 nan K07497
gene-evm.TU.Chr17.666 rna-evm.model.Chr17.666 Chr17 20022250 20031647 uncharacterized protein nan K06092
gene-evm.TU.Chr17.668 rna-evm.model.Chr17.668 Chr17 20137001 20138917 PREDICTED: cyclin G-associated kinase [EC:2.7.11.1] nan K22023
gene-evm.TU.Chr17.67 rna-evm.model.Chr17.67 Chr17 2425347 2428651 PREDICTED: Solute carrier family 12 member 8 nan K14428
gene-evm.TU.Chr17.670 rna-evm.model.Chr17.670 Chr17 20293090 20327790 PREDICTED: nuclease HARBI1 [EC:3.1.-.-] nan K23222
gene-evm.TU.Chr17.671 rna-evm.model.Chr17.671 Chr17 20342325 20343911 uncharacterized protein nan nan
gene-evm.TU.Chr17.672_evm.TU.Chr17.673 rna-evm.model.Chr17.672_evm.model.Chr17.673 Chr17 20355301 20368900 PREDICTED: Somatostatin receptor type 4 GO:0004930;GO:0007186;GO:0016020 K04284
gene-evm.TU.Chr17.674 rna-evm.model.Chr17.674 Chr17 20432833 20433375 PREDICTED: THAP domain-containing protein 11 nan K23222
gene-evm.TU.Chr17.675 rna-evm.model.Chr17.675 Chr17 20433662 20434459 PREDICTED: alpha-2-macroglobulin GO:0003676 K23204
gene-evm.TU.Chr17.677 rna-evm.model.Chr17.677 Chr17 20548686 20556234 uncharacterized protein nan K04705

For more detailed data, you can explore the Download section to access the full dataset.