CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr17.565 rna-evm.model.Chr17.565 Chr17 16862951 16875369 PREDICTED: DENN domain-containing protein 3 nan K20162
gene-evm.TU.Chr17.566 rna-evm.model.Chr17.566 Chr17 16875606 16883098 PREDICTED: DENN domain-containing protein 3 GO:0005515 K20162
gene-evm.TU.Chr17.567 rna-evm.model.Chr17.567 Chr17 16887454 16893174 PREDICTED: Failed axon connections homolog nan K21106
gene-evm.TU.Chr17.568 rna-evm.model.Chr17.568 Chr17 16922623 16942371 PREDICTED: DENN domain-containing protein 3 GO:0005515 K20162
gene-evm.TU.Chr17.569 rna-evm.model.Chr17.569 Chr17 16986875 16994713 PREDICTED: MRN complex-interacting protein nan K25972
gene-evm.TU.Chr17.57 rna-evm.model.Chr17.57 Chr17 2287594 2290004 uncharacterized protein nan nan
gene-evm.TU.Chr17.572 rna-evm.model.Chr17.572 Chr17 17135055 17135700 PREDICTED: RNA-directed DNA polymerase from mobile element jockey nan K00986
gene-evm.TU.Chr17.576 rna-evm.model.Chr17.576 Chr17 17162271 17162786 uncharacterized protein nan K20358
gene-evm.TU.Chr17.578 rna-evm.model.Chr17.578 Chr17 17199973 17200449 PREDICTED: Zinc finger protein 354C GO:0003676 K09191
gene-evm.TU.Chr17.579 rna-evm.model.Chr17.579 Chr17 17209443 17214625 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.