CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr17.514 rna-evm.model.Chr17.514 Chr17 15434387 15436589 uncharacterized protein nan K05230
gene-evm.TU.Chr17.515 rna-evm.model.Chr17.515 Chr17 15439116 15440614 PREDICTED: cyclic GMP-AMP synthase [EC:2.7.7.86] nan K23092
gene-evm.TU.Chr17.516 rna-evm.model.Chr17.516 Chr17 15460036 15493786 PREDICTED: Phosphatidylinositol 4-kinase beta GO:0046854;GO:0048015 K19801
gene-evm.TU.Chr17.517 rna-evm.model.Chr17.517 Chr17 15507226 15512455 uncharacterized protein nan K19896
gene-evm.TU.Chr17.52 rna-evm.model.Chr17.52 Chr17 2094978 2100225 PREDICTED: Solute carrier family 12 member 8 nan K14428
gene-evm.TU.Chr17.520 rna-evm.model.Chr17.520 Chr17 15528110 15531253 uncharacterized protein nan K21100
gene-evm.TU.Chr17.521 rna-evm.model.Chr17.521 Chr17 15534293 15541922 PREDICTED: Copine family protein 2 nan K16280
gene-evm.TU.Chr17.522 rna-evm.model.Chr17.522 Chr17 15554457 15570449 uncharacterized protein nan nan
gene-evm.TU.Chr17.523 rna-evm.model.Chr17.523 Chr17 15592059 15619968 PREDICTED: Succinate dehydrogenase [ubiquinone] flavoprotein subunit B, mitochondrial GO:0016491;GO:0055114 K00234
gene-evm.TU.Chr17.526 rna-evm.model.Chr17.526 Chr17 15649782 15650393 PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] nan K08388

For more detailed data, you can explore the Download section to access the full dataset.