CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr17.381 rna-evm.model.Chr17.381 Chr17 11928041 11935220 PREDICTED: 1-deoxyxylulose-5-phosphate synthase YajO GO:0016491;GO:0055114 K23107
gene-evm.TU.Chr17.382 rna-evm.model.Chr17.382 Chr17 11935650 11939653 uncharacterized protein nan nan
gene-evm.TU.Chr17.383 rna-evm.model.Chr17.383 Chr17 11946728 11947132 PREDICTED: Protein lethal(2)essential for life nan K09542
gene-evm.TU.Chr17.384 rna-evm.model.Chr17.384 Chr17 11951800 11962346 PREDICTED: Bone morphogenetic protein 7 GO:0008083 K16621
gene-evm.TU.Chr17.385 rna-evm.model.Chr17.385 Chr17 11964434 11979381 PREDICTED: NmrA-like family domain-containing protein 1 nan K19267
gene-evm.TU.Chr17.388 rna-evm.model.Chr17.388 Chr17 12032757 12039999 PREDICTED: 60S ribosomal protein L7 nan K02937
gene-evm.TU.Chr17.389 rna-evm.model.Chr17.389.1 Chr17 12049214 12062424 uncharacterized protein nan K08975
gene-evm.TU.Chr17.39 rna-evm.model.Chr17.39 Chr17 1510132 1557077 PREDICTED: ankyrin repeat domain-containing protein 50 nan K20466
gene-evm.TU.Chr17.390 rna-evm.model.Chr17.390 Chr17 12062491 12066046 PREDICTED: Chromatin accessibility complex protein 1 nan K11656
gene-evm.TU.Chr17.391 rna-evm.model.Chr17.391.1 Chr17 12074669 12104291 uncharacterized protein nan K25180

For more detailed data, you can explore the Download section to access the full dataset.