CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr17.1672 rna-evm.model.Chr17.1672 Chr17 46402588 46403472 uncharacterized protein nan K19533
gene-evm.TU.Chr17.1674 rna-evm.model.Chr17.1674 Chr17 46494729 46499779 PREDICTED: vomeronasal 2 receptor nan K04763
gene-evm.TU.Chr17.1675 rna-evm.model.Chr17.1675 Chr17 46500735 46502072 PREDICTED: cyclic GMP-AMP synthase [EC:2.7.7.86] nan K23092
gene-evm.TU.Chr17.1676 rna-evm.model.Chr17.1676 Chr17 46550760 46561793 uncharacterized protein nan K23368
gene-evm.TU.Chr17.1677 rna-evm.model.Chr17.1677 Chr17 46606899 46607749 PREDICTED: p24 family protein gamma-2 nan K03570
gene-evm.TU.Chr17.1678 rna-evm.model.Chr17.1678 Chr17 46621509 46626421 PREDICTED: importin-4 nan K11703
gene-evm.TU.Chr17.1679 rna-evm.model.Chr17.1679 Chr17 46653724 46656626 PREDICTED: C5a anaphylatoxin chemotactic receptor 1 (Fragment) GO:0004930;GO:0007186;GO:0016020 K04214
gene-evm.TU.Chr17.168 rna-evm.model.Chr17.168 Chr17 5202667 5206077 PREDICTED: Three-prime repair exonuclease 1 nan K02342
gene-evm.TU.Chr17.1681 rna-evm.model.Chr17.1681 Chr17 46674068 46674529 uncharacterized protein nan nan
gene-evm.TU.Chr17.1682 rna-evm.model.Chr17.1682 Chr17 46691253 46704505 PREDICTED: C5a anaphylatoxin chemotactic receptor 1 (Fragment) GO:0004930;GO:0007186;GO:0016020 K04214

For more detailed data, you can explore the Download section to access the full dataset.