CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr1.2687 rna-evm.model.Chr1.2687 Chr1 83754184 83757397 PREDICTED: G2/M phase-specific E3 ubiquitin-protein ligase [EC:2.3.2.26] nan nan
gene-evm.TU.Chr1.2689 rna-evm.model.Chr1.2689 Chr1 83761782 83770656 PREDICTED: G2/M phase-specific E3 ubiquitin-protein ligase GO:0004842 K22371
gene-evm.TU.Chr1.2690 rna-evm.model.Chr1.2690 Chr1 83773396 83779163 PREDICTED: solute carrier family 15, member 5 GO:0015074 K07497
gene-evm.TU.Chr1.2692 rna-evm.model.Chr1.2692 Chr1 83856316 83876364 PREDICTED: Glutamate receptor GO:0004970;GO:0005216;GO:0006811;GO:0016020;GO:0038023 K05199
gene-evm.TU.Chr1.2694 rna-evm.model.Chr1.2694 Chr1 84276061 84279916 uncharacterized protein GO:0005506;GO:0016491;GO:0016705;GO:0031418;GO:0055114 K07394
gene-evm.TU.Chr1.2695 rna-evm.model.Chr1.2695 Chr1 84331730 84334079 PREDICTED: Uncharacterized protein KIAA1958 nan K24675
gene-evm.TU.Chr1.2697 rna-evm.model.Chr1.2697 Chr1 84539905 84541389 PREDICTED: Cytochrome P450 2U1 GO:0005506;GO:0016705;GO:0020037;GO:0055114 K07422
gene-evm.TU.Chr1.2698 rna-evm.model.Chr1.2698 Chr1 84550615 84552099 PREDICTED: Cytochrome P450 2U1 GO:0005506;GO:0016705;GO:0020037;GO:0055114 K07418
gene-evm.TU.Chr1.2699 rna-evm.model.Chr1.2699 Chr1 84556298 84582851 PREDICTED: Dehydrogenase/reductase SDR family member on chromosome X nan K11170
gene-evm.TU.Chr1.270 rna-evm.model.Chr1.270 Chr1 8199082 8201282 PREDICTED: Protein wech GO:0008270 K12026

For more detailed data, you can explore the Download section to access the full dataset.