CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr1.2623 rna-evm.model.Chr1.2623 Chr1 82034672 82036678 uncharacterized protein nan K24624
gene-evm.TU.Chr1.2624 rna-evm.model.Chr1.2624 Chr1 82037261 82038758 uncharacterized protein nan K11244
gene-evm.TU.Chr1.2626 rna-evm.model.Chr1.2626 Chr1 82045938 82047407 uncharacterized protein nan K11244
gene-evm.TU.Chr1.2627 rna-evm.model.Chr1.2627 Chr1 82056680 82059454 uncharacterized protein nan K26068
gene-evm.TU.Chr1.2629 rna-evm.model.Chr1.2629 Chr1 82123558 82124773 PREDICTED: BTB/POZ domain-containing protein KCTD1/15 nan K04763
gene-evm.TU.Chr1.263 rna-evm.model.Chr1.263 Chr1 7645114 7645815 PREDICTED: exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] nan K12035
gene-evm.TU.Chr1.2631 rna-evm.model.Chr1.2631 Chr1 82131576 82235602 PREDICTED: Microtubule-associated tumor suppressor candidate 2 nan K10421
gene-evm.TU.Chr1.2632 rna-evm.model.Chr1.2632 Chr1 82300548 82306474 PREDICTED: Potassium voltage-gated channel protein egl-36 GO:0005216;GO:0005249;GO:0005515;GO:0006811;GO:0006813;GO:0008076;GO:0016020;GO:0051260;GO:0055085 K04887
gene-evm.TU.Chr1.2633 rna-evm.model.Chr1.2633 Chr1 82329053 82331125 PREDICTED: Cathepsin K GO:0006508;GO:0008234 K01371
gene-evm.TU.Chr1.2634 rna-evm.model.Chr1.2634 Chr1 82364502 82372374 uncharacterized protein nan K21659

For more detailed data, you can explore the Download section to access the full dataset.