CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr17.1513 rna-evm.model.Chr17.1513 Chr17 42590702 42595588 uncharacterized protein nan K04908
gene-evm.TU.Chr17.1514 rna-evm.model.Chr17.1514 Chr17 42597553 42611704 PREDICTED: Solute carrier family 22 member 18 GO:0005215;GO:0016020;GO:0055085 K08214
gene-evm.TU.Chr17.1516 rna-evm.model.Chr17.1516 Chr17 42670395 42693648 PREDICTED: ATP-dependent 6-phosphofructokinase, platelet type GO:0003872;GO:0006002;GO:0006096 K00850
gene-evm.TU.Chr17.1517 rna-evm.model.Chr17.1517 Chr17 42758922 42782551 PREDICTED: FAS-associated factor 2-B GO:0005515 K18726
gene-evm.TU.Chr17.1518 rna-evm.model.Chr17.1518.1 Chr17 42790465 42831553 PREDICTED: WD repeat-containing protein 35 GO:0005515 K19674
gene-evm.TU.Chr17.1519 rna-evm.model.Chr17.1519 Chr17 42849698 42859313 uncharacterized protein nan K26031
gene-evm.TU.Chr17.152 rna-evm.model.Chr17.152 Chr17 4766413 4768838 PREDICTED: Thyroglobulin nan K10809
gene-evm.TU.Chr17.1520 rna-evm.model.Chr17.1520 Chr17 42862505 42881657 PREDICTED: Extracellular serine/threonine protein kinase FAM20C nan K21958
gene-evm.TU.Chr17.1521 rna-evm.model.Chr17.1521 Chr17 42883594 42887584 PREDICTED: EMILIN-2 nan K23284
gene-evm.TU.Chr17.1522 rna-evm.model.Chr17.1522 Chr17 42892572 42896430 PREDICTED: Complement C1q tumor necrosis factor-related protein 3 nan K24236

For more detailed data, you can explore the Download section to access the full dataset.