CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr17.150 rna-evm.model.Chr17.150 Chr17 4722055 4733110 PREDICTED: TRAF3-interacting protein 1 nan K08827
gene-evm.TU.Chr17.1501 rna-evm.model.Chr17.1501 Chr17 42298965 42312934 uncharacterized protein nan K10398
gene-evm.TU.Chr17.1502 rna-evm.model.Chr17.1502 Chr17 42313146 42344752 uncharacterized protein nan K03260
gene-evm.TU.Chr17.1505 rna-evm.model.Chr17.1505 Chr17 42479381 42491215 PREDICTED: Transcriptional repressor scratch 1 GO:0003676 K09219
gene-evm.TU.Chr17.1506 rna-evm.model.Chr17.1506 Chr17 42499060 42501764 uncharacterized protein nan K22724
gene-evm.TU.Chr17.1508 rna-evm.model.Chr17.1508 Chr17 42506420 42509207 uncharacterized protein nan K21066
gene-evm.TU.Chr17.151 rna-evm.model.Chr17.151 Chr17 4740632 4762163 uncharacterized protein nan nan
gene-evm.TU.Chr17.1510 rna-evm.model.Chr17.1510 Chr17 42517275 42530020 uncharacterized protein nan nan
gene-evm.TU.Chr17.1511 rna-evm.model.Chr17.1511 Chr17 42535823 42538598 PREDICTED: Gem-associated protein 7 GO:0034719 K13135
gene-evm.TU.Chr17.1512 rna-evm.model.Chr17.1512 Chr17 42538839 42555245 PREDICTED: Tetratricopeptide repeat protein 39C nan K24943

For more detailed data, you can explore the Download section to access the full dataset.